Table of Contents
Davyd Perdomo's Research Logs and Meeting Notes
Research Log
May 26, 2024
Items Finished
- Complete on my on-board tasks.
- Downloaded OpenFoam on Aircraft
Working On
- Running an example on OpenFoam
- Learning commands for Linux
July 6, 2024
Items Finished
- Ran OpenFOAM Docker image on Littlestorm. Following this procedure:
1)Edit your ~/.bashrc file and add the line: export XAUTHORITY=$HOME/.Xauthority
2)Start with “Step 5: Launching openfoam11-linux” at the following link https://openfoam.org/download/11-linux/ However, when you get to the last line that launches “openfoam11-linux” , you instead need to launch it like this: openfoam11-linux -p 510 -xhost ←-This will ensure that graphical programs get passed through and show up correctly when xforwarding. You may not need the extra flags if you are using a VNC session.
3)Once in the container, return to https://openfoam.org/download/11-linux/, and go to Step 6: Testing openfoam11-linux. This should ensure that everything is set correctly and afterward you should be ready to work with the program.
- Cloned Joe O'Brien's dissertation repository from https://github.com/jrobrien91/dissertation
Working On
- Running PyVista on Littlestorm.
- Setting up OpenFOAM wiki page.
- Running first iteration from O'Brien's dissertation.
Meetings
May 22, 2024
Discussions
- Davyd requested access to new Wiki site, please put weekly Research Log on this page.
- Davyd read over Thesis. Talked about software. Talked about Docker.
- ParaView - Could not run on Aircraft because of memory. Maybe Littlestorm is better.
- Got OpenFoam running on Aircraft using notes at https://develop.openfoam.com/Development/openfoam/-/wikis/precompiled/docker#running-openfoam-in-a-container
Tasks
- Davyd - Send email Invite for next Wednesday at 3 pm CT.
- Davyd/David - Should clone the Joe repository, https://github.com/jrobrien91
- Davyd - Try to run some example OpenFOAM / Tutorials.
May 29, 2024
Discussions
- File permission error.
- Got docker to run.
- Emailed Joe about clone his repository.
Tasks
- Davyd - See about getting openFOAM working on Littlestorm.
June 27, 2024 (2 pm)
Discussions
- VPN was blocking connection to Little storm.
- New problem - Lock screen on Littlestorm, just locked. Emailed Derek.
- Joe sent link, after making public. Worked on getting clone of the repository.
- ParaView, (or PyVista (Joe used)), We should start with PyVista.
- Note: On Little storm, we should try to install all the latest software.
- Monday July 8, 8 am CT, zoom. Send me invite.
Tasks
- Add to Wiki page the Joe github repository cloning.
- Add to Wiki information from Joe about getting OpenFOAM running on a workstation.
- Run openFOAM docker image on Littlestorm.
- Run PyVista on Littlestorm.
July 17, 2024
Discussion
- Talked with Joe O'Brien. Got data collection document done. Upload data to One Drive
- Five figure. Have title, Joe further ahead.
- Filters from CapeEx19. August/September. Look for the August 3 case.
- Hopefully, in a week or so, you can download the data collection.
- Tried to run in OpenFOAM, version 11. Were running OpenFOAM version 8. Getting error.
- Try to debug the error and syntax.
- Find templates. Points file.
- What is the global path to aircraft sim directory. Use pwd command.
- Create shared directory on /nas/home/OpenFOAM
Tasks
- David - Send to library and Davyd test.
- Davyd - Get the data set from the library data collection and put on Littlestorm.
- David - Send email to John Wold to get Davyd full access to the Wiki site.
- Davyd - Run BlockMesh command on Aircraft to see if it works with older version
August 7, 2024
Discussion
- Discussed our travel.
- Fixed some syntax to get things to update configuration file for version 11 from version 8.
- What the next step.
- Reproduce a figure in the Thesis.
- Check on if there is sufficient information in the Thesis provide.
- Davyd has everything shown in Thesis Figure 11.
- See if there is sufficient information.
- Asked about the sudo commands.
- If we need to do things requiring sudo, we need to talk with Derek.
- Use the 'top' from shell to see what process are running and how much memory is used.
- Next meet, Wednesday. We can figure out time.
Tasks
- Davyd - Update with information on Wiki about the change.
- David - Get working to download Joe's 86 GB file, and get link to Data Collection.
- Davyd - Try to run OpenFOAM simulation to generated files for creating Figure 12 and maybe Figure 13.
August 21, 2024
Discussion
- Davyd attend the August 19/20 Python Workshop. All set now to write code for analyzing output for OpenFOAM.
- Put in request to John Wold to access full Wiki site so Davyd can update OpenFOAM page.
- Put in request to to get special permission for ATSC 494-07.
Tasks
- Davyd - Update with information on Wiki about the change.
- David - Get working to download Joe's 86 GB file, and get link to Data Collection.
- Davyd - Try to run OpenFOAM simulation to generated files for creating Figure 12 and maybe Figure 13.
September 24, 2024
Discussion
- Davyd has updated the Wiki page about login and sets to run OpenFOAM.
- Davyd was missing an object, tried aircraft. Littlestorm has OpenFOAM version 11, on Aircraft has OpenFOAM version 7 or 8.
- Litlestorm issue, documented below. Getting the “solutions” file posted from Joe. Located on Littlestorm at /nas/home/Radar_Data/obrien/obrien-oracles-solutions.tar.gz.
Tasks
- David - Move files to /nas/home/Radar_Data/obrien/obrien-oracles-solutions.tar.gz and uncompressed archive.
- Email Joe O'brien to see about his paper.
- Davyd - Email Derek to see if he can install Docker and OpenFOAM7 on aircraft.
- Davyd - Look at the “solutions” file to see if you can locate files you need (missing object).
- Davyd - Send Invite for next Thursday, at 3:00 pm
October 3, 2024
Discussion
- “solutions” file unzipped to /nas/home/Radar_Data/Obrien/solutions.
- .obj and CAD files not located.
Tasks
- Davyd - Email Joe O'brien about getting the CAD files.