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--- atmos:researchmeetingnotes:researchmeetingnotes:home:davyd_perdomo [2024/06/27 19:06] – delene
+++ atmos:researchmeetingnotes:researchmeetingnotes:home:davyd_perdomo [2024/10/03 21:08] (current) – [October 3, 2024] perdomo
@@ Line 1: / Line 1: @@
-====== Davyd Perdomo's Research Notes ======
+====== Davyd Perdomo's Research Logs and Meeting Notes ======
+===== Research Log =====
+==== May 26, 2024 ====
+=== Items Finished ===
+  * Complete on my on-board tasks.
+  * Downloaded OpenFoam on Aircraft
+=== Working On ===
+  *Running an example on OpenFoam
+  *Learning commands for Linux
+==== July 6, 2024 ====
+=== Items Finished ===
+  * Ran OpenFOAM Docker image on Littlestorm. Following this procedure:
+)Edit your ~/.bashrc file and add the line: export XAUTHORITY=$HOME/.Xauthority
+)Start with "Step 5: Launching openfoam11-linux" at the following link [[https://openfoam.org/download/11-linux/]]  However, when you get to the last line that launches "openfoam11-linux" ,  you instead need to launch it like this: openfoam11-linux -p 510 -xhost  <--This will ensure that graphical programs get passed through and show up correctly when xforwarding.   You may not need the extra flags if you are using a VNC session.
+)Once in the container, return to [[https://openfoam.org/download/11-linux/]], and go to Step 6: Testing openfoam11-linux. This should ensure that everything is set correctly and afterward you should be ready to work with the program.
+  * Cloned Joe O'Brien's dissertation repository from [[https://github.com/jrobrien91/dissertation]]
+=== Working On ===
+  *Running PyVista on Littlestorm.
+  *Setting up OpenFOAM wiki page.
+  *Running first iteration from O'Brien's dissertation.
 ===== Meetings =====
@@ Line 8: / Line 33: @@
   * Davyd read over Thesis. Talked about software. Talked about Docker.
   * ParaView - Could not run on Aircraft because of memory.  Maybe Littlestorm is better.
   * Got OpenFoam running on Aircraft using notes at [[https://develop.openfoam.com/Development/openfoam/-/wikis/precompiled/docker#running-openfoam-in-a-container|https://develop.openfoam.com/Development/openfoam/-/wikis/precompiled/docker#running-openfoam-in-a-container]]
-  *
 === Tasks ===
@@ Line 29: / Line 53: @@
 ==== June 27, 2024 (2 pm) ====
 === Discussions ===
- * VPN was blocking connection to Little storm.
+  * VPN was blocking connection to Little storm.
- * New problem - Lock screen on Littlestorm, just locked. Emailed Derek.
+  * New problem - Lock screen on Littlestorm, just locked. Emailed Derek.
- * Joe sent link, after making public. Worked on getting clone of the repository.
+  * Joe sent link, after making public. Worked on getting clone of the repository.
- * ParaView, (or PyVista (Joe used)), We should start with PyVista.
+  * ParaView, (or PyVista (Joe used)), We should start with PyVista.
- * Note: On Little storm, we should try to install all the latest software.
+  * Note: On Little storm, we should try to install all the latest software.
- * Monday July 8, 8 am CT, zoom. Send me invite.
+  * Monday July 8, 8 am CT, zoom. Send me invite.
 Tasks
- * Add to Wiki page the Joe github repository cloning.
+  * Add to Wiki page the Joe github repository cloning.
- * Add to Wiki information from Joe about getting OpenFOAM running on a workstation.
+  * Add to Wiki information from Joe about getting OpenFOAM running on a workstation.
- * Run openFOAM docker image on Littlestorm.
+  * Run openFOAM docker image on Littlestorm.
- * Run PyVista on Littlestorm.
+  * Run PyVista on Littlestorm.
+==== July 17, 2024 ====
+=== Discussion ===
+  * Talked with Joe O'Brien. Got data collection document done.  Upload data to One Drive
+  * Five figure. Have title, Joe further ahead.
+  * Filters from CapeEx19.  August/September. Look for the August 3 case.
+  * Hopefully, in a week or so, you can download the data collection.
+  * Tried to run in OpenFOAM, version 11.  Were running OpenFOAM version 8.  Getting error.
+    * Try to debug the error and syntax.
+  * Find templates. Points file.
+  * What is the global path to aircraft sim directory.  Use pwd command.
+  * Create shared directory on /nas/home/OpenFOAM
+=== Tasks ===
+  * David - Send to library and Davyd test.
+  * Davyd - Get the data set from the library data collection and put on Littlestorm.
+  * David - Send email to John Wold to get Davyd full access to the Wiki site.
+  * Davyd - Run BlockMesh command on Aircraft to see if it works with older version
+==== August 7, 2024 ====
+=== Discussion ===
+  * Discussed our travel.
+  * Fixed some syntax to get things to update configuration file for version 11 from version 8.
+  * What the next step.
+    * Reproduce a figure in the Thesis.
+    * Check on if there is sufficient information in the Thesis provide.
+  * Davyd has everything shown in Thesis Figure 11.
+  * See if there is sufficient information.
+  * Asked about the sudo commands.
+    * If we need to do things requiring sudo, we need to talk with Derek.
+  * Use the 'top' from shell to see what process are running and how much memory is used.
+  * Next meet, Wednesday. We can figure out time.
+=== Tasks ===
+  * Davyd - Update with information on Wiki about the change.
+  * David - Get working to download Joe's 86 GB file, and get link to Data Collection.
+  * Davyd - Try to run OpenFOAM simulation to generated files for creating Figure 12 and maybe Figure 13.
+==== August 21, 2024 ====
+=== Discussion ===
+  * Davyd attend the August 19/20 Python Workshop. All set now to write code for analyzing output for OpenFOAM.
+  * Put in request to John Wold to access full Wiki site so Davyd can update OpenFOAM page.
+  * Put in request to to get special permission for ATSC 494-07.
+=== Tasks ===
+  * Davyd - Update with information on Wiki about the change.
+  * David - Get working to download Joe's 86 GB file, and get link to Data Collection.
+  * Davyd - Try to run OpenFOAM simulation to generated files for creating Figure 12 and maybe Figure 13.
+===== September 24, 2024 =====
+=== Discussion ===
+  * Davyd has updated the Wiki page about login and sets to run OpenFOAM.
+  * Davyd was missing an object, tried aircraft.  Littlestorm has OpenFOAM version 11, on Aircraft has OpenFOAM version 7 or 8.
+  * Litlestorm issue, documented below.  Getting the "solutions" file posted from Joe.  Located on Littlestorm at /nas/home/Radar_Data/obrien/obrien-oracles-solutions.tar.gz.
+=== Tasks ===
+  * David - Move files to /nas/home/Radar_Data/obrien/obrien-oracles-solutions.tar.gz and uncompressed archive.
+  * Email Joe O'brien to see about his paper.
+  * Davyd - Email Derek to see if he can install Docker and OpenFOAM7 on aircraft.
+  * Davyd - Look at the "solutions" file to see if you can locate files you need (missing object).
+  * Davyd - Send Invite for next Thursday, at 3:00 pm
+===== October 3, 2024 =====
+=== Discussion ===
+  * "solutions" file unzipped to /nas/home/Radar_Data/Obrien/solutions.
+  * .obj and CAD files not located.
+=== Tasks ===
+  * Davyd - Email Joe O'brien about getting the CAD files.
-===== Research Log =====
-==== May 26, 2024 ====
-=== Items Finished ===
-  * Complete on my on-board tasks.
-  * Downloaded OpenFoam on Aircraft
-=== Working On ===
-  *Running an example on OpenFoam
-  *Learning commands for Linux